Message boards : Number crunching : Rosetta Application Version Release Log
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David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0 |
Version 1.32 of minirosetta is now released. This version includes various updates to the graphics application. Minirosetta graphics now look like rosetta++ graphics. Additionally, a linux graphics application is now available. The minirosetta database is now being packaged and distributed with the application to deal with backwards compatibility. Please keep in mind that the graphics frame rate may be reduced due to the extra overhead of shared data between the worker application and the graphics application. To increase the frame rate at the cost of cpu cycles, you can set the "Percentage of CPU time used for graphics" R@h project preference to a higher value than the default. Also keep in mind that there may still be issues with the linux graphics application. |
Chu Send message Joined: 23 Feb 06 Posts: 120 Credit: 112,439 RAC: 0 |
The minirosetta application has been updated to version 1.39. In this version, we added two important applications to minirosetta, docking and protein folding with explicit zinc metal ion. New features have been added to the graphic to show chain colors for a multi-chain protein complex and display metal ions by sphere. |
Sarel Send message Joined: 11 May 06 Posts: 51 Credit: 81,712 RAC: 0 |
The minirosetta application has been updated to version 1.40. This version contains improved protein-protein docking along with small-molecule ligands and the capabilities to do design, where the surface amino-acid residues are allowed to mutate during the simulation. Messages on the Scientific aspects will be posted on the message board. |
David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0 |
The minirosetta application has been updated to version 1.45. This version contains various bug fixes related to long run times and finer checkpointing for relax jobs and a possible fix to the preemption problem. It also includes a fix for the h-bonding nan problem. |
Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
THe application has been updated to 1.47. This contains bugfixes to address the sporadic errors occuring in cs_vanilla workunits. Further it fixes a problem with constraints which allows us to now run homology modellling jobs with constraints, which should improve prediction results. http://beautifulproteins.blogspot.com/ http://www.miketyka.com/ |
Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
THe application has been updated to 1.54. For details go here: https://boinc.bakerlab.org/rosetta/forum_thread.php?id=4691 http://beautifulproteins.blogspot.com/ http://www.miketyka.com/ |
Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
THe application has been updated to 1.65. This contains a small number of bugfixes, but mainly new science, particularily folding with sparse experimental data (In particular residual dipolar couplings http://en.wikipedia.org/wiki/Residual_dipolar_coupling ) http://beautifulproteins.blogspot.com/ http://www.miketyka.com/ |
Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
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Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
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Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
Rosetta 1.75 is out - update your firewalls. Cheers, Mike http://beautifulproteins.blogspot.com/ http://www.miketyka.com/ |
Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
Rosetta 1.76 is up. Fixing a bug that causes 'Validation Fails' |
Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
Rosetta 1.80 is up. |
Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
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Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
1.90 is up https://boinc.bakerlab.org/rosetta/forum_thread.php?id=5014 |
Mod.Sense Volunteer moderator Send message Joined: 22 Aug 06 Posts: 4018 Credit: 0 RAC: 0 |
Version 1.91 is up. It is identical to 1.90, but uses a new database to avoid the recent signature verification problems that have been encountered. No changes are required on the home user's BOINC setup. The new version will be downloaded automatically. You may need to review your firewall or anti-virus software if they need to be aware of the new application. We will be using the same "Problems with..." thread as the 1.90 version: https://boinc.bakerlab.org/rosetta/forum_thread.php?id=5014 Rosetta Moderator: Mod.Sense |
Mike Tyka Send message Joined: 20 Oct 05 Posts: 96 Credit: 2,190 RAC: 0 |
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Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
1.95 is repackaged to 1.96. I'll be working this weekend to make sure it runs fine. |
Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
Sorry for the late post. Minirosetta v1.98 is up. |
Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
Minirosetta 2.00 is now up. |
Yifan Song Volunteer moderator Project developer Project scientist Send message Joined: 26 May 09 Posts: 62 Credit: 7,322 RAC: 0 |
minirosetta 2.02 is up: https://boinc.bakerlab.org/rosetta/forum_thread.php?id=5176 |
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Rosetta Application Version Release Log
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