Nobel Prize to David Baker

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Profile [AF>Le_Pommier] Jerome_C2005

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Message 109872 - Posted: 14 Oct 2024, 19:16:07 UTC - in response to Message 109870.  

"Computing resources were provided by the volunteers who have donated the spare CPU cycles of their cellular telephones and computers to the Rosetta@Home project; the Hyak supercomputer at the University of Washington; and the Rhino cluster at the Fred Hutchinson Cancer Center"

*this* is concrete indeed, article is one year old (only). Thanks for the info.

I hope it is still true with the current application(s) and for the future.

Do you have any information about the beta version here ?

And about TrRosetta ?
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Profile [VENETO] boboviz

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Message 109873 - Posted: 14 Oct 2024, 19:52:39 UTC - in response to Message 109872.  
Last modified: 14 Oct 2024, 19:54:31 UTC

I hope it is still true with the current application(s) and for the future.
Do you have any information about the beta version here ?
And about TrRosetta ?


Rosetta protocols (that are the same of Rosetta@Home and Foldit) are used daily on Robetta Server
The problems about results/publications is that a lot of these are behind paywall (Nature, Science, etc)
For this paper (April 2024), for example, you have to pay. But Bakerlab, luckily, made it available for free:
We thank the University of Washington’s Hyak supercomputing team and
the volunteers of the Rosetta@home project for providing compute resources

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Message 109874 - Posted: 14 Oct 2024, 20:46:47 UTC - in response to Message 109864.  
Last modified: 14 Oct 2024, 21:46:09 UTC

Regarding TrRosetta, it appears to have been superseded by RoseTTAFold as seen on the Robetta page where it says 'May 27, 2022 - TrRosetta is no longer available as a modeling option. Please use the more accurate method, RoseTTAFold. '.

I don't believe there is any info about the Beta version 6.06. Over at Ralph, though, they were testing a new application called RoseTTAFold All-Atom. Last work for that application was in early September from what I can tell based on the forums. And there was also Rosetta version 4.29 in testing as recently as 4 August 2024.

Overall, development seems to be active, but communication is nearly non-existent.
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Profile [AF>Le_Pommier] Jerome_C2005

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Message 109879 - Posted: 16 Oct 2024, 8:37:57 UTC - in response to Message 109874.  

Thanks for all the info !
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Message 109919 - Posted: 26 Oct 2024, 15:28:30 UTC

Dr. Baker is interviewed by Quanta Magazine here, and the BOINC app graphics is displayed twice shortly after the 11 minute mark.
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Message boards : Rosetta@home Science : Nobel Prize to David Baker



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