Message boards : Rosetta@home Science : ESMFold
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[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,623,704 RAC: 9,591 |
ESMFold Machine learning methods for protein structure prediction have taken advantage of the evolutionary information present in multiple sequence alignments to derive accurate structural information, but predicting structure accurately from a single sequence is much more difficult. Lin et al. trained transformer protein language models with up to 15 billion parameters on experimental and high-quality predicted structures and found that information about atomic-level structure emerged in the model as it was scaled up. They created ESMFold, a sequence-to-structure predictor that is nearly as accurate as alignment-based methods and considerably faster. The increased speed permitted the generation of a database, the ESM Metagenomic Atlas, containing more than 600 million metagenomic proteins This is the github |
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